基础医学与临床 ›› 2019, Vol. 39 ›› Issue (7): 1001-1006.

• 研究论文 • 上一篇    下一篇

YTHDC1基因在小鼠小脑发育及人髓母细胞瘤组织中的动态表达

吴高锒1,赵赋2,张晶2,李春德2,牛亚梅1,刘丕楠2,佟伟民1   

  1. 1. 中国医学科学院 基础医学研究所 北京协和医学院 基础学院
    2. 首都医科大学 附属北京天坛医院
  • 收稿日期:2019-05-10 修回日期:2019-05-22 出版日期:2019-07-05 发布日期:2019-07-02
  • 通讯作者: 佟伟民 E-mail:wmtong@ibms.pumc.edu.cn
  • 基金资助:
    中国医学科学院中央级公益性科研院所基本科研业务费项目;中国医学科学院医学表观遗传学研究中心项目

Dynamic expression of YTHDC1 in mice cerebellar development and human medulloblastoma

  • Received:2019-05-10 Revised:2019-05-22 Online:2019-07-05 Published:2019-07-02
  • Contact: Wei-min TONG E-mail:wmtong@ibms.pumc.edu.cn

摘要: 目的 探讨RNA m6A甲基化结合蛋白YTHDC1在小脑发育和髓母细胞瘤中的表达模式及其可能发挥的作用。方法 分别以小鼠小脑、髓母细胞瘤和细胞系为研究对象,在转录组测序结果的基础上,分析RNA水平表达模式;用免疫印迹和免疫组化检测YTHDC1蛋白的表达;在Daoy细胞中敲低甲基转移酶METTL3并通过m6A-IP-qPCR方法检测YTHDC1 RNA甲基化水平及对YTHDC1蛋白丰度的影响。结果 小鼠小脑发育过程中Ythdc1 RNA水平未见明显改变,蛋白表达显著下降(P<0.05)。YTHDC1在P7的小脑内颗粒神经元高表达,而在P60小脑中表达降低。与正常或癌旁组织相比,YTHDC1在肿瘤组织中RNA水平未见明显改变,蛋白水平总体偏低(P<0.005)。YTHDC1在髓母细胞瘤中m6A水平显著升高(P<0.05),而METTL3敲低引起YTHDC1 m6A水平下降以及蛋白表达上调。结论 小脑发育及髓母细胞瘤中YTHDC1蛋白表达变化显著,这一过程受到m6A介导的转录后调控作用,进而影响小脑发育及髓母细胞瘤的发生。

关键词: 关键词:RNA m6A甲基化, YTHDC1, 小脑发育, 髓母细胞瘤

Abstract: Objective To study the expression pattern of RNA m6A binding protein YTHDC1 during mouse cerebellar development and in human medulloblastoma. Methods Relative expression level of YTHDC1 RNA in the mice cerebellum, medulloblastoma and Daoy cell lines were analyzed based on RNA-seq results. Western blot and immunohistochemical staining were performed to detect the expression of YTHDC1 protein. The methyltransferase METTL3 was knocked down in Daoy cells, followed by m6A-IP-qPCR method to detect the change in YTHDC1 methylation level and the subsequent effect on the YTHDC1 protein level. Results During mice cerebellar development, the YTHDC1 expression remained constant in RNA level but showed a gradual reduction in protein level. Similarly, the expression of YTHDC1 protein in internal granular layer decreased significantly from postnatal day 7 (P7) to P60. Comparison between medulloblastoma tissues and adjacent para-carcinoma tissues, showed no apparent change of YTHDC1 in RNA level, but a significant decrease in protein level. Notably, YTHDC1 RNA methylation level increased in medulloblastoma, and the decreased m6A methylation level of YTHDC1 caused by METTL3 knockdown resulted in increased YTHDC1 protein expression. Conclusions In both cerebellar development and medulloblastoma, a dynamic change of YTHDC1 protein expression, but not YTHDC1 RNA, was observed. The RNA m6A modification of YTHDC1 can regulate its protein expression at post-transcriptional level, suggesting that RNA m6A methylation of YTHDC1 may impact on cerebellar development and medulloblastoma through regulating its protein expression.

Key words: Key words: RNA m6A methylation, YTHDC1, cerebellar development, medulloblastoma

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