基础医学与临床 ›› 2015, Vol. 35 ›› Issue (1): 79-85.

• 研究论文 • 上一篇    下一篇

散发型嗜铬细胞瘤易感基因的热点区域的筛选

王栋,李汉忠   

  1. 中国医学科学院 北京协和医学院 北京协和医院
  • 收稿日期:2014-07-03 修回日期:2014-10-08 出版日期:2015-01-05 发布日期:2014-12-30
  • 通讯作者: 李汉忠 E-mail:jellowaaa7@163.com

Screen the tumor-related regions of sporadic pheochromacytoma

  • Received:2014-07-03 Revised:2014-10-08 Online:2015-01-05 Published:2014-12-30

摘要: 目的 筛选与散发型嗜铬细胞瘤易感基因相关的染色体区域。 方法 收集北京协和医院2011年9月至2013年5月临床诊断的42例散发型嗜铬细胞瘤病例。提取嗜铬细胞瘤及外周血的基因组DNA,用Sanger测序法检测遗传型嗜铬细胞瘤的突变基因;在证实为散发型的部分病例中,用单核苷酸多态性芯片(SNP 6.0 芯片)对其肿瘤组织及外周血的基因组进行扫描分析,精确定位可能的热点区域;然后以Q-PCR技术在其余的病例中进一步验证,从而最终确定散发型嗜铬细胞瘤相关的染色体片段。结果 38例散发型病例,4例遗传型病例。通过SNP 6.0芯片扫描发现染色体片段的缺失较扩增更为常见,缺失的染色体包括 1p、3q、17p、22q和11p。1p上的chr1:74,957,006~86,132,879, chr1:58,096,424~67,700,471和chr1:98,902,091~107,622,4303个片段的缺失最为常见;Q-PCR验证后,上述3个片段仍为最常见的缺失区域。4例Ret突变者均出现上述3个片段的缺失。结论 1号染色体短臂的部分区域上可能存散发型嗜铬细胞瘤相关的抑癌基因。

关键词: 散发型嗜铬细胞瘤, 单核苷酸多态性芯片, 基因

Abstract: Obiective Narrow down the candidate regions of sporadic pheochromacytoma(PCC). Methods Total of 42 patients who were clinically diagnosed as sporadic PCC from 2011-9 to 2013-5 in PUMCH were enrolled. Extract whole genome DNA from their tumors as well as peripheral blood leukocytes. Then exclude inherited cases by Sanger sequence mutation. Within 14 verified cases of sporadic PCC, apply single nucleotide polymorphism (SNP) chip to detect whole genome DNA copy number variations (CNV) and loss of heterozygosity (LOH) to initially locate the hot regions. Finally Apply Q-PCR to confirm the hot regions in left cases. Results In this study 38 cases were identified as sporadic PCC, and 4 as inherited cases. CNV were detected in 14/14 tumors, of which deletions were more common. Missing regions occurred in 1p、3q、17p、22q、11p. On the other hand, of the 3 inherited cases, deletion was also detected. The loss of parts of arm 1p is the most common, including chr1:74,957,006~86, 132,879, chr1:58,096,424~67,700,471, and chr1:98,902,091~107,622,430. The result of Q-PCR confirmed the above-mentioned three regions, and the three segments are final candidate regions. Conclusion Part deletions of 1p in most cases are the most striking phenomenon, which indicating part deletions of 1p may occur with PCC development, and there may be some tumor suppressor gene(s) within these areas.

Key words: sporadic pheochromacytomas, single nucleotide polymorphism chip, genes

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