基础医学与临床 ›› 2025, Vol. 45 ›› Issue (6): 786-792.doi: 10.16352/j.issn.1001-6325.2025.06.0786

• 研究论文 • 上一篇    下一篇

HAP1细胞有丝分裂过程中的动态转录物组研究

吴雪丽, 杨玉容, 保永莉, 吴汝成, 王莉莎, 陈阳*   

  1. 中国医学科学院基础医学研究所 北京协和医学院基础学院 生物化学与分子生物学系重大疾病共性机制研究全国重点实验室,北京 100005
  • 收稿日期:2025-02-21 修回日期:2025-03-21 出版日期:2025-06-05 发布日期:2025-05-26
  • 通讯作者: *yc@ibms.pumc.edu.cn
  • 基金资助:
    中国医学科学院中央级公益性科研院所基本科研业务费(2021-RC310-007)

Study of dynamic transcriptome during mitosis of HAP1 cells

WU Xueli, YANG Yurong, BAO Yongli, WU Rucheng, WANG Lisha, CHEN Yang*   

  1. State Key Laboratory of Common Mechanism Research for Major Diseases,Department of Biochemistry and Molecular Biology, Institute of Basic Medical Sciences CAMS, School of Basic Medicine PUMC,Beijing 100005,China
  • Received:2025-02-21 Revised:2025-03-21 Online:2025-06-05 Published:2025-05-26

摘要: 目的 研究HAP1细胞在有丝分裂同步化后释放过程中分子水平上的动态变化,旨在全面了解有丝分裂期间的转录物图谱及其调控机制。方法 使用诺考达唑对HAP1细胞进行有丝分裂同步化阻滞后释放,分别在释放后0 min、20 min、80 min收集细胞样本并进行转录物组测序(RNA-seq)。对转录物组数据进行清洗后分析差异表达基因、表达趋势聚类和功能富集,结合蛋白质相互作用网络,探讨HAP1细胞在有丝分裂过程中信号通路的变化。结果 HAP1细胞在有丝分裂同步释放后的转录组在时间序列上经历了显著变化,差异基因聚类分析揭示了四个基因簇,富集于p53信号传导、细胞质翻译等重要生物学过程。结论 HAP1细胞有丝分裂过程中转录组呈现时间依赖性动态变化,细胞应激响应、翻译调控和染色质重塑关键信号通路协同作用,确保细胞在退出有丝分裂中平衡生长与应激反应。

关键词: 有丝分裂, 转录物组, 细胞周期同步化, 信号通路调控

Abstract: Objective To comprehensively understand the map of transcripts during mitosis and their regulatory mechanisms of HAP1 cells by conducting transcriptome sequencing analysis after being released by mitotic synchronization arrest. Methods HAP1 cells were subjected to mitotic synchronous arrest with nocodazole and samples were collected after 0, 20, 80 min release, and RNA sequencing(RNA-seq) were performed. The transcriptome data was cleaned and the differentially expressed genes, expression trend clustering and functional enrichment combined with the protein interaction network were analyzed to explore the changes of signaling pathways in HAP1 cells during mitosis. Results The transcriptome of HAP1 cells after synchronous release from mitosis underwent significant changes in time series, and differential gene cluster analysis revealed four gene clusters were enriched in important biological processes such as p53 signaling and cytoplasmic translation. Conclusions The transcriptome time-dependent dynamic changes during mitosis in HAP1 cells are coordinated regulation of key signaling pathways including cellular stress response, translational control and chromatin remodeling, ensuring a balance between growth and stress response upon mitotic exit.

Key words: mitosis, transcriptome, cell cycle synchronization, signaling pathway regulation

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